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John T. Prince
John T. Prince
Platform Engineer (Owlet); Former Asst Prof of Chemistry and Biochemistry, Brigham Young
Verified email at owletcare.com - Homepage
Title
Cited by
Cited by
Year
Chromatographic alignment of ESI-LC-MS proteomics data sets by ordered bijective interpolated warping
JT Prince, EM Marcotte
Analytical chemistry 78 (17), 6140-6152, 2006
2862006
The need for a public proteomics repository
JT Prince, MW Carlson, R Wang, P Lu, EM Marcotte
Nature biotechnology 22 (4), 471-472, 2004
2122004
LC-MS alignment in theory and practice: a comprehensive algorithmic review
R Smith, D Ventura, JT Prince
Briefings in bioinformatics 16 (1), 104-117, 2015
1642015
Metabolic-stress-induced rearrangement of the 14-3-3ζ interactome promotes autophagy via a ULK1-and AMPK-regulated 14-3-3ζ interaction with phosphorylated Atg9
VK Weerasekara, DJ Panek, DG Broadbent, JB Mortenson, AD Mathis, ...
Molecular and cellular biology 34 (24), 4379-4388, 2014
1272014
Proteomics, lipidomics, metabolomics: a mass spectrometry tutorial from a computer scientist's point of view
R Smith, AD Mathis, D Ventura, JT Prince
BMC bioinformatics 15, 1-14, 2014
1042014
Mass spectrometry of the M. smegmatis proteome: protein expression levels correlate with function, operons, and codon bias
R Wang, JT Prince, EM Marcotte
Genome research 15 (8), 1118-1126, 2005
932005
Integrating shotgun proteomics and mRNA expression data to improve protein identification
SR Ramakrishnan, C Vogel, JT Prince, R Wang, Z Li, LO Penalva, ...
Bioinformatics 25 (11), 1397-1403, 2009
902009
Mitochondrial fission mediates ceramide-induced metabolic disruption in skeletal muscle
ME Smith, TS Tippetts, ES Brassfield, BJ Tucker, A Ockey, AC Swensen, ...
Biochemical Journal 456 (3), 427-439, 2013
892013
Resilient and connected landscapes for terrestrial conservation
MG Anderson, A Barnett, M Clark, J Prince, A Olivero Sheldon, B Vickery
The Nature Conservancy, Eastern Conservation Science, Eastern Regional …, 2016
642016
Massifquant: open-source Kalman filter-based XC-MS isotope trace feature detection
CJ Conley, R Smith, RJO Torgrip, RM Taylor, R Tautenhahn, JT Prince
Bioinformatics 30 (18), 2636-2643, 2014
562014
Dynamical structure function identifiability conditions enabling signal structure reconstruction
J Adebayo, T Southwick, V Chetty, E Yeung, Y Yuan, J Goncalves, ...
2012 IEEE 51st IEEE Conference on Decision and Control (CDC), 4635-4641, 2012
552012
Structures of the Gβ-CCT and PhLP1–Gβ-CCT complexes reveal a mechanism for G-protein β-subunit folding and Gβγ dimer assembly
RL Plimpton, J Cuéllar, CWJ Lai, T Aoba, A Makaju, S Franklin, AD Mathis, ...
Proceedings of the National Academy of Sciences 112 (8), 2413-2418, 2015
542015
A fast coarse filtering method for peptide identification by mass spectrometry
SR Ramakrishnan, R Mao, AA Nakorchevskiy, JT Prince, WS Willard, ...
Bioinformatics 22 (12), 1524-1531, 2006
542006
Sequence and structural characterization of great salt lake bacteriophage CW02, a member of the T7-like supergroup
PS Shen, MJ Domek, E Sanz-García, A Makaju, RM Taylor, R Hoggan, ...
Journal of virology 86 (15), 7907-7917, 2012
422012
Ceramides mediate cigarette smoke-induced metabolic disruption in mice
MO Thatcher, TS Tippetts, MB Nelson, AC Swensen, DR Winden, ...
American Journal of Physiology-Endocrinology and Metabolism 307 (10), E919-E927, 2014
402014
Programmed Cell Death Protein 5 Interacts with the Cytosolic Chaperonin Containing Tailless Complex Polypeptide 1 (CCT) to Regulate β-Tubulin Folding*♦
CM Tracy, AJ Gray, J Cuéllar, TS Shaw, AC Howlett, RM Taylor, JT Prince, ...
Journal of Biological Chemistry 289 (7), 4490-4502, 2014
402014
Novel algorithms and the benefits of comparative validation
R Smith, D Ventura, JT Prince
Bioinformatics 29 (12), 1583-1585, 2013
392013
The genomes, proteomes, and structures of three novel phages that infect the Bacillus cereus group and carry putative virulence factors
JH Grose, DM Belnap, JD Jensen, AD Mathis, JT Prince, BD Merrill, ...
Journal of Virology 88 (20), 11846-11860, 2014
362014
AICAR inhibits ceramide biosynthesis in skeletal muscle
KA Erickson, ME Smith, TS Anthonymuthu, MJ Evanson, ES Brassfield, ...
Diabetology & Metabolic Syndrome 4 (1), 45, 2012
352012
Mspire-Simulator: LC-MS shotgun proteomic simulator for creating realistic gold standard data
AB Noyce, R Smith, J Dalgleish, RM Taylor, KC Erb, N Okuda, JT Prince
Journal of proteome research 12 (12), 5742-5749, 2013
322013
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