| The RAST Server: rapid annotations using subsystems technology RK Aziz, D Bartels, AA Best, M DeJongh, T Disz, RA Edwards, K Formsma, ... BMC genomics 9, 1-15, 2008 | 12094 | 2008 |
| The metagenomics RAST server–a public resource for the automatic phylogenetic and functional analysis of metagenomes F Meyer, D Paarmann, M D'Souza, R Olson, EM Glass, M Kubal, ... BMC bioinformatics 9, 1-8, 2008 | 4055 | 2008 |
| The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes R Overbeek, T Begley, RM Butler, JV Choudhuri, HY Chuang, M Cohoon, ... Nucleic acids research 33 (17), 5691-5702, 2005 | 2321 | 2005 |
| KBase: the United States department of energy systems biology knowledgebase AP Arkin, RW Cottingham, CS Henry, NL Harris, RL Stevens, S Maslov, ... Nature biotechnology 36 (7), 566-569, 2018 | 1182 | 2018 |
| The BioPAX community standard for pathway data sharing E Demir, MP Cary, S Paley, K Fukuda, C Lemer, I Vastrik, G Wu, ... Nature biotechnology 28 (9), 935-942, 2010 | 807 | 2010 |
| MG-RAST, a metagenomics service for analysis of microbial community structure and function KP Keegan, EM Glass, F Meyer Microbial environmental genomics (MEG), 207-233, 2016 | 525 | 2016 |
| Staphylococcus aureus virulence genes identified by bursa aurealis mutagenesis and nematode killing T Bae, AK Banger, A Wallace, EM Glass, F Åslund, O Schneewind, ... Proceedings of the National Academy of Sciences 101 (33), 12312-12317, 2004 | 404 | 2004 |
| Using the metagenomics RAST server (MG-RAST) for analyzing shotgun metagenomes EM Glass, J Wilkening, A Wilke, D Antonopoulos, F Meyer Cold Spring Harbor Protocols 2010 (1), pdb. prot5368, 2010 | 369 | 2010 |
| The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools A Wilke, T Harrison, J Wilkening, D Field, EM Glass, N Kyrpides, ... BMC bioinformatics 13, 1-5, 2012 | 342 | 2012 |
| The Earth Microbiome Project: Meeting report of the “1st EMP meeting on sample selection and acquisition” at Argonne National Laboratory October 6th 2010 JA Gilbert, F Meyer, J Jansson, J Gordon, N Pace, J Tiedje, R Ley, ... Standards in genomic sciences 3, 249-253, 2010 | 240 | 2010 |
| The MG-RAST metagenomics database and portal in 2015 A Wilke, J Bischof, W Gerlach, E Glass, T Harrison, KP Keegan, T Paczian, ... Nucleic acids research 44 (D1), D590-D594, 2016 | 227 | 2016 |
| Bacterial community structure and functional contributions to emergence of health or necrotizing enterocolitis in preterm infants EC Claud, KP Keegan, JM Brulc, L Lu, D Bartels, E Glass, EB Chang, ... Microbiome 1, 1-11, 2013 | 190 | 2013 |
| From genomics to metagenomics N Desai, D Antonopoulos, JA Gilbert, EM Glass, F Meyer Current opinion in biotechnology 23 (1), 72-76, 2012 | 127 | 2012 |
| Identification of Francisella tularensis Himar1-Based Transposon Mutants Defective for Replication in Macrophages TM Maier, MS Casey, RH Becker, CW Dorsey, EM Glass, N Maltsev, ... Infection and immunity 75 (11), 5376-5389, 2007 | 109 | 2007 |
| Bacillus anthracis Sortase A (SrtA) Anchors LPXTG Motif-Containing Surface Proteins to the Cell Wall Envelope AH Gaspar, LA Marraffini, EM Glass, KL DeBord, H Ton-That, ... Journal of bacteriology 187 (13), 4646-4655, 2005 | 101 | 2005 |
| Generating a Collection of Insertion Mutations in the Staphylococcus aureus Genome Using bursa aurealis T Bae, EM Glass, O Schneewind, D Missiakas Microbial gene essentiality: protocols and bioinformatics, 103-116, 2008 | 96 | 2008 |
| PUMA2—grid-based high-throughput analysis of genomes and metabolic pathways N Maltsev, E Glass, D Sulakhe, A Rodriguez, MH Syed, T Bompada, ... Nucleic acids research 34 (suppl_1), D369-D372, 2006 | 88 | 2006 |
| A RESTful API for Accessing Microbial Community Data for MG-RAST A Wilke, J Bischof, T Harrison, T Brettin, M D'Souza, W Gerlach, ... PLoS Comput Biol 11 (1), 2015 | 87 | 2015 |
| The DOE systems biology knowledgebase (KBase) AP Arkin, RL Stevens, RW Cottingham, S Maslov, CS Henry, P Dehal, ... BioRxiv, 096354, 2016 | 78 | 2016 |
| The complete genome sequence for putative H2‐ and S‐oxidizer Candidatus Sulfuricurvum sp., assembled de novo from an aquifer‐derived metagenome KM Handley, D Bartels, EJ O'Loughlin, KH Williams, WL Trimble, ... Environmental microbiology 16 (11), 3443-3462, 2014 | 74 | 2014 |
Andreas WilkeArgonne National LaboratoryVerified email at anl.gov
