Ananth Kalyanaraman
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The B73 maize genome: complexity, diversity, and dynamics
PS Schnable, D Ware, RS Fulton, JC Stein, F Wei, S Pasternak, C Liang, ...
science 326 (5956), 1112, 2009
34882009
The genome of the domesticated apple (Malus× domestica Borkh.)
R Velasco, A Zharkikh, J Affourtit, A Dhingra, A Cestaro, A Kalyanaraman, ...
Nature genetics 42 (10), 833-839, 2010
17982010
Genome sequencing and analysis of the model grass Brachypodium distachyon
International Brachypodium Initiative
Nature 463 (7282), 763, 2010
15132010
Parallel heuristics for scalable community detection
H Lu, M Halappanavar, A Kalyanaraman
Parallel Computing 47, 19-37, 2015
1182015
Efficient clustering of large EST data sets on parallel computers
A Kalyanaraman, S Aluru, S Kothari, V Brendel
Nucleic Acids Research 31 (11), 2963-2974, 2003
1102003
Network-on-chip hardware accelerators for biological sequence alignment
S Sarkar, GR Kulkarni, PP Pande, A Kalyanaraman
Computers, IEEE Transactions on 59 (1), 29-41, 2010
672010
Efficient algorithms and software for detection of full-length LTR retrotransposons
A Kalyanaraman, S Aluru
Computational Systems Bioinformatics Conference, 2005. Proceedings. 2005 …, 2005
602005
Hardware accelerators for biocomputing: A survey
S Sarkar, T Majumder, A Kalyanaraman, PP Pande
Proceedings of 2010 IEEE International Symposium on Circuits and Systems …, 2010
572010
Space and time efficient parallel algorithms and software for EST clustering
A Kalyanaraman, S Aluru, V Brendel, S Kothari
IEEE Transactions on parallel and distributed systems 14 (12), 1209-1221, 2003
562003
Detailed analysis of a contiguous 22-Mb region of the maize genome
F Wei, JC Stein, C Liang, J Zhang, RS Fulton, RS Baucom, E De Paoli, ...
PloS Genetics 5 (11), e1000728, 2009
502009
A survey of SL1-spliced transcripts from the root-lesion nematode Pratylenchus penetrans
M Mitreva, AA Elling, M Dante, AP Kloek, A Kalyanaraman, S Aluru, ...
Molecular Genetics and Genomics 272 (2), 138-148, 2004
492004
Assembling genomes on large-scale parallel computers
A Kalyanaraman, SJ Emrich, PS Schnable, S Aluru
Proceedings 20th IEEE International Parallel & Distributed Processing …, 2006
402006
pGraph: Efficient Parallel Construction of Large-Scale Protein Sequence Homology Graphs
C Wu, A Kalyanaraman, WR Cannon
38*
Attenuation of virulence in an apicomplexan hemoparasite results in reduced genome diversity at the population level
A Lau, A Kalyanaraman, I Echaide, G Palmer, R Bock, M Pedroni, ...
BMC genomics 12 (1), 410, 2011
362011
Algorithms for balanced graph colorings with applications in parallel computing
H Lu, M Halappanavar, D Chavarria-Miranda, AH Gebremedhin, ...
IEEE Transactions on Parallel and Distributed Systems 28 (5), 1240-1256, 2016
32*2016
BioEarth: Envisioning and developing a new regional earth system model to inform natural and agricultural resource management
JC Adam, JC Stephens, SH Chung, MP Brady, RD Evans, CE Kruger, ...
Climatic Change 129 (3-4), 555-571, 2015
302015
An efficient parallel approach for identifying protein families in large-scale metagenomic data sets
C Wu, A Kalyanaraman
SC'08: Proceedings of the 2008 ACM/IEEE Conference on Supercomputing, 1-10, 2008
282008
Parallel algorithms for clustering biological graphs on distributed and shared memory architectures
I Rytsareva, T Chapman, A Kalyanaraman
International Journal of High Performance Computing and Networking 7 (4 …, 2014
272014
MapReduce implementation of a hybrid spectral library-database search method for large-scale peptide identification
A Kalyanaraman, WR Cannon, B Latt, DJ Baxter
Bioinformatics 27 (21), 3072-3073, 2011
262011
Distributed louvain algorithm for graph community detection
S Ghosh, M Halappanavar, A Tumeo, A Kalyanaraman, H Lu, ...
2018 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2018
242018
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Artículos 1–20