Erick Armingol
Erick Armingol
PhD in Bioinformatics and Systems Biology, University of California, San Diego
Verified email at - Homepage
Cited by
Cited by
Deciphering cell–cell interactions and communication from gene expression
E Armingol, A Officer, O Harismendy, NE Lewis
Nature Reviews Genetics 22 (2), 71–88, 2021
Context-aware deconvolution of cell–cell communication with Tensor-cell2cell
E Armingol, HM Baghdassarian, C Martino, A Perez-Lopez, C Aamodt, ...
Nature Communications 13 (1), 1-15, 2022
Bacterial modification of the host glycosaminoglycan heparan sulfate modulates SARS-CoV-2 infectivity
C Martino, BP Kellman, DR Sandoval, TM Clausen, CA Marotz, SJ Song, ...
bioRxiv, 2020
Inferring a spatial code of cell-cell interactions across a whole animal body
E Armingol, A Ghaddar, CJ Joshi, H Baghdassarian, I Shamie, J Chan, ...
PLOS Computational Biology 18 (11), e1010715, 2022
Whole-body gene expression atlas of an adult metazoan
A Ghaddar, E Armingol, C Huynh, L Gevirtzman, NE Lewis, R Waterston, ...
Science Advances 9 (25), eadg0506, 2023
Understanding the impact of the cofactor swapping of isocitrate dehydrogenase over the growth phenotype of Escherichia coli on acetate by using constraint-based …
E Armingol, E Tobar, R Cabrera
PloS one 13 (4), e0196182, 2018
The diversification of methods for studying cell–cell interactions and communication
E Armingol, HM Baghdassarian, NE Lewis
Nature Reviews Genetics, 1-20, 2024
Combining LIANA and Tensor-cell2cell to decipher cell-cell communication across multiple samples
HM Baghdassarian, D Dimitrov, E Armingol, J Saez-Rodriguez, NE Lewis
Cell Reports Methods 4 (4), 100758, 2024
An improved algorithm for flux variability analysis
D Kenefake, E Armingol, NE Lewis, EN Pistikopoulos
BMC bioinformatics 23 (1), 1-14, 2022
Unraveling the coordinated dynamics of protein-and metabolite-mediated cell-cell communication
E Armingol, RO Larsen, M Cequeira, H Baghdassarian, NE Lewis
bioRxiv, 2022
Protein structure, a genetic encoding for glycosylation
B Kellman, D Sandoval, O Zaytseva, K Brock, S Baboo, D Nachmanson, ...
bioRxiv, 2024.05. 15.594261, 2024
Decoding glycosylation potential from protein structure across human glycoproteins with a multi-view recurrent neural network
B Kellman, J Mariethoz, Y Zhang, S Shaul, M Jeffris, D Sandoval, M Jeffris, ...
bioRxiv, 2024.05. 15.594334, 2024
Deciphering Patterns of Cell–Cell Interactions and Communication in Multicellular Organizations
EA Armingol Gonzalez
UC San Diego, 2023
Análisis de balance de flujos del crecimiento en acetato de Escherichia Coli: efecto del cambio de especificidad por el cofactor de la Isocitrato deshidrogenasa
EA Armingol Gonzalez
Universisdad de Chile, 2015
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