SnB: crystal structure determination via shake-and-bake R Miller, SM Gallo, HG Khalak, CM Weeks Journal of Applied Crystallography 27 (4), 613-621, 1994 | 353 | 1994 |
Sequence-based design of bioactive small molecules that target precursor microRNAs SP Velagapudi, SM Gallo, MD Disney Nature chemical biology 10 (4), 291-297, 2014 | 346 | 2014 |
ORegAnno: an open-access community-driven resource for regulatory annotation OL Griffith, SB Montgomery, B Bernier, B Chu, K Kasaian, S Aerts, ... Nucleic acids research 36 (suppl_1), D107-D113, 2007 | 318 | 2007 |
A comparison of virtualization technologies for HPC JP Walters, V Chaudhary, M Cha, S Guercio, S Gallo 22nd International Conference on Advanced Information Networking and …, 2008 | 224 | 2008 |
REDfly v3.0: toward a comprehensive database of transcriptional regulatory elements in Drosophila SM Gallo, DT Gerrard, D Miner, M Simich, B Des Soye, CM Bergman, ... Nucleic acids research 39 (suppl_1), D118-D123, 2010 | 221 | 2010 |
REDfly 2.0: an integrated database of cis -regulatory modules and transcription factor binding sites in Drosophila MS Halfon, SM Gallo, CM Bergman Nucleic acids research 36 (suppl_1), D594-D598, 2007 | 130 | 2007 |
Open XDMoD: A tool for the comprehensive management of high-performance computing resources JT Palmer, SM Gallo, TR Furlani, MD Jones, RL DeLeon, JP White, ... Computing in Science & Engineering 17 (4), 52-62, 2015 | 109 | 2015 |
REDfly: a Regulatory Element Database for Drosophila SM Gallo, L Li, Z Hu, MS Halfon Bioinformatics 22 (3), 381-383, 2006 | 104 | 2006 |
Comprehensive resource use monitoring for HPC systems with TACC stats T Evans, WL Barth, JC Browne, RL DeLeon, TR Furlani, SM Gallo, ... 2014 First International Workshop on HPC User Support Tools, 13-21, 2014 | 95 | 2014 |
A slurm simulator: Implementation and parametric analysis NA Simakov, MD Innus, MD Jones, RL DeLeon, JP White, SM Gallo, ... High Performance Computing Systems. Performance Modeling, Benchmarking, and …, 2018 | 65 | 2018 |
REDfly: the transcriptional regulatory element database for Drosophila J Rivera, SVE Keränen, SM Gallo, MS Halfon Nucleic acids research 47 (D1), D828-D834, 2019 | 61 | 2019 |
Analysis of secondary structural elements in human microRNA hairpin precursors B Liu, JL Childs-Disney, BM Znosko, D Wang, M Fallahi, SM Gallo, ... BMC bioinformatics 17, 1-11, 2016 | 52 | 2016 |
A workload analysis of NSF's innovative HPC resources using XDMoD NA Simakov, JP White, RL DeLeon, SM Gallo, MD Jones, JT Palmer, ... arXiv preprint arXiv:1801.04306, 2018 | 49 | 2018 |
CaringGuidance™ after breast cancer diagnosis eHealth psychoeducational intervention to reduce early post-diagnosis distress RM Lally, KA Kupzyk, G Bellavia, J Hydeman, S Gallo, VS Helgeson, ... Supportive Care in Cancer 28, 2163-2174, 2020 | 42 | 2020 |
Identification of interacting transcription factors regulating tissue gene expression in human Z Hu, SM Gallo BMC genomics 11, 1-15, 2010 | 41 | 2010 |
Performance metrics and auditing framework using application kernels for high‐performance computer systems TR Furlani, MD Jones, SM Gallo, AE Bruno, CD Lu, A Ghadersohi, ... Concurrency and Computation: Practice and Experience 25 (7), 918-931, 2013 | 39 | 2013 |
Grid-enabled virtual organization based dynamic firewall ML Green, SM Gallo, R Miller Fifth IEEE/ACM International Workshop on Grid Computing, 208-216, 2004 | 36 | 2004 |
Effect of meltdown and spectre patches on the performance of HPC applications NA Simakov, MD Innus, MD Jones, JP White, SM Gallo, RL DeLeon, ... arXiv preprint arXiv:1801.04329, 2018 | 34 | 2018 |
Using XDMoD to facilitate XSEDE operations, planning and analysis TR Furlani, BL Schneider, MD Jones, J Towns, DL Hart, SM Gallo, ... Proceedings of the Conference on Extreme Science and Engineering Discovery …, 2013 | 32 | 2013 |
Comparing the performance of clusters, Hadoop, and Active Disks on microarray correlation computations JA Delmerico, NA Byrnes, AE Bruno, MD Jones, SM Gallo, V Chaudhary 2009 International Conference on High Performance Computing (HiPC), 378-387, 2009 | 28 | 2009 |