| Interactive microbial genome visualization with GView A Petkau, M Stuart-Edwards, P Stothard, G Van Domselaar Bioinformatics 26 (24), 3125-3126, 2010 | 345 | 2010 |
| CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database BP Alcock, W Huynh, R Chalil, KW Smith, AR Raphenya, MA Wlodarski, ... Nucleic acids research 51 (D1), D690-D699, 2023 | 306 | 2023 |
| Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa AR Reimer, G Van Domselaar, S Stroika, M Walker, H Kent, C Tarr, ... Emerging infectious diseases 17 (11), 2113, 2011 | 190 | 2011 |
| Surveillance of Enterococcus spp. reveals distinct species and antimicrobial resistance diversity across a One-Health continuum R Zaheer, SR Cook, R Barbieri, N Goji, A Cameron, A Petkau, RO Polo, ... Scientific reports 10 (1), 3937, 2020 | 184 | 2020 |
| SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology A Petkau, P Mabon, C Sieffert, NC Knox, J Cabral, M Iskander, M Iskander, ... Microbial genomics 3 (6), e000116, 2017 | 145 | 2017 |
| Evolutionary dynamics of Vibrio cholerae O1 following a single-source introduction to Haiti LS Katz, A Petkau, J Beaulaurier, S Tyler, ES Antonova, MA Turnsek, ... MBio 4 (4), 10.1128/mbio. 00398-13, 2013 | 138* | 2013 |
| A comparative analysis of the Lyve-SET phylogenomics pipeline for genomic epidemiology of foodborne pathogens LS Katz, T Griswold, AJ Williams-Newkirk, D Wagner, A Petkau, C Sieffert, ... Frontiers in Microbiology 8, 375, 2017 | 123 | 2017 |
| Correlation between Phenotypic and In Silico Detection of Antimicrobial Resistance in Salmonella enterica in Canada Using Staramr A Bharat, A Petkau, BP Avery, JC Chen, JP Folster, CA Carson, ... Microorganisms 10 (2), 292, 2022 | 71 | 2022 |
| A primer on infectious disease bacterial genomics T Lynch, A Petkau, N Knox, M Graham, G Van Domselaar Clinical microbiology reviews 29 (4), 881-913, 2016 | 57 | 2016 |
| Genomic insights from whole genome sequencing of four clonal outbreak Campylobacter jejuni assessed within the global C. jejuni population CG Clark, C Berry, M Walker, A Petkau, DOR Barker, C Guan, A Reimer, ... BMC genomics 17, 1-16, 2016 | 42 | 2016 |
| The integrated rapid infectious disease analysis (IRIDA) platform TC Matthews, FR Bristow, EJ Griffiths, A Petkau, J Adam, D Dooley, ... BioRxiv, 381830, 2018 | 40 | 2018 |
| SNVPhyl: a single nucleotide variant phylogenomics pipeline for microbial genomic epidemiology. Microb Genom 3: e000116 A Petkau, P Mabon, C Sieffert, NC Knox, J Cabral, M Iskander, M Iskander, ... | 28 | 2017 |
| A comparative analysis of the Lyve-SET phylogenomics pipeline for genomic epidemiology of foodborne pathogens. Front Microbiol 8: 375 LS Katz, T Griswold, AJ Williams-Newkirk, D Wagner, A Petkau, C Sieffert, ... | 20 | 2017 |
| Shared genome analyses of notable listeriosis outbreaks, highlighting the critical importance of epidemiological evidence, input datasets and interpretation criteria A Reimer, K Weedmark, A Petkau, CL Peterson, M Walker, N Knox, ... Microbial Genomics 5 (1), e000237, 2019 | 17 | 2019 |
| Vibrio cholerae Outbreak Genomics Task Force. 2011. Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa AR Reimer, G Van Domselaar, S Stroika, M Walker, H Kent, C Tarr, ... Emerg. Infect. Dis 17, 2113-2121, 0 | 16 | |
| A multilocus sequence typing scheme for Mycobacterium abscessus complex (MAB-multilocus sequence typing) using whole-genome sequencing data M Wuzinski, AK Bak, A Petkau, WHB Demczuk, H Soualhine, MK Sharma The International Journal of Mycobacteriology 8 (3), 273-280, 2019 | 10 | 2019 |
| Sequence database versioning for command line and Galaxy bioinformatics servers DM Dooley, AJ Petkau, G Van Domselaar, WWL Hsiao Bioinformatics 32 (8), 1275-1277, 2016 | 5 | 2016 |
| Investigation of Two Mycobacterium abscessus Outbreaks in Quebec Using Whole Genome Sequencing M Wuzinski, H Soualhine, E Valliere, PM Akochy, N Cloutier, A Petkau, ... BioMed Research International 2020, 1-7, 2020 | 3 | 2020 |
| A framework for the indexing, querying, clustering, and visualization of microbial genomes for surveillance and outbreak investigation A Petkau | | 2022 |
| Outbreak surveillance and investigation using IRIDA and SNVPhyl A Petkau | | 2016 |
Gary Van DomselaarNational Microbiology Laboratory, Public Health Agency of CanadaDirección de correo verificada de phac-aspc.gc.ca
