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Andrew Hoopes
Andrew Hoopes
MIT
Verified email at mgh.harvard.edu
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Cited by
Year
Learn2Reg: comprehensive multi-task medical image registration challenge, dataset and evaluation in the era of deep learning
A Hering, L Hansen, TCW Mok, ACS Chung, H Siebert, S Häger, A Lange, ...
IEEE Transactions on Medical Imaging 42 (3), 697-712, 2022
1902022
SynthStrip: skull-stripping for any brain image
A Hoopes, JS Mora, AV Dalca, B Fischl, M Hoffmann
NeuroImage 260, 119474, 2022
1832022
Hypermorph: Amortized hyperparameter learning for image registration
A Hoopes, M Hoffmann, B Fischl, J Guttag, AV Dalca
Information Processing in Medical Imaging: 27th International Conference …, 2021
1412021
The brain tumor sequence registration challenge: establishing correspondence between pre-operative and follow-up MRI scans of diffuse glioma patients
B Baheti, D Waldmannstetter, S Chakrabarty, H Akbari, M Bilello, ...
arXiv preprint arXiv:2112.06979, 2021
472021
A deep learning toolbox for automatic segmentation of subcortical limbic structures from MRI images
DN Greve, B Billot, D Cordero, A Hoopes, M Hoffmann, AV Dalca, B Fischl, ...
NeuroImage 244, 118610, 2021
412021
PSACNN: Pulse sequence adaptive fast whole brain segmentation
A Jog, A Hoopes, DN Greve, K Van Leemput, B Fischl
NeuroImage 199, 553-569, 2019
402019
Learning the effect of registration hyperparameters with hypermorph
A Hoopes, M Hoffmann, DN Greve, B Fischl, J Guttag, AV Dalca
The journal of machine learning for biomedical imaging 1, 2022
322022
TopoFit: rapid reconstruction of topologically-correct cortical surfaces
A Hoopes, JE Iglesias, B Fischl, D Greve, AV Dalca
Proceedings of machine learning research 172, 508, 2022
202022
A longitudinal method for simultaneous whole-brain and lesion segmentation in multiple sclerosis
S Cerri, A Hoopes, DN Greve, M Mühlau, K Van Leemput
Machine Learning in Clinical Neuroimaging and Radiogenomics in Neuro …, 2020
152020
Anatomy-specific acquisition-agnostic affine registration learned from fictitious images
M Hoffmann, A Hoopes, B Fischl, AV Dalca
Medical Imaging 2023: Image Processing 12464, 1246402, 2023
142023
An open-source tool for longitudinal whole-brain and white matter lesion segmentation
S Cerri, DN Greve, A Hoopes, H Lundell, HR Siebner, M Mühlau, ...
NeuroImage: Clinical 38, 103354, 2023
142023
Anatomy-aware and acquisition-agnostic joint registration with synthmorph
M Hoffmann, A Hoopes, DN Greve, B Fischl, AV Dalca
Imaging Neuroscience, 2024
92024
Hypernet-Ensemble Learning of Segmentation Probability for Medical Image Segmentation with Ambiguous Labels
S Hong, AK Bonkhoff, A Hoopes, M Bretzner, MD Schirmer, AK Giese, ...
arXiv preprint arXiv:2112.06693, 2021
92021
Synthetic data in generalizable, learning-based neuroimaging
K Gopinath, A Hoopes, DC Alexander, SE Arnold, Y Balbastre, ...
Imaging Neuroscience, 2024
2024
VoxelPrompt: A Vision-Language Agent for Grounded Medical Image Analysis
A Hoopes, VI Butoi, JV Guttag, AV Dalca
arXiv preprint arXiv:2410.08397, 2024
2024
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