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Thibaut Jombart
Thibaut Jombart
London School of Hygiene and Tropical Medicine
Verified email at imperial.ac.uk
Title
Cited by
Cited by
Year
adegenet: a R package for the multivariate analysis of genetic markers
T Jombart
Bioinformatics 24 (11), 1403-1405, 2008
73502008
Discriminant analysis of principal components: a new method for the analysis of genetically structured populations
T Jombart, S Devillard, F Balloux
BMC genetics 11, 1-15, 2010
50092010
adegenet 1.3-1: new tools for the analysis of genome-wide SNP data
T Jombart, I Ahmed
Bioinformatics 27 (21), 3070-3071, 2011
30192011
Pandemic potential of a strain of influenza A (H1N1): early findings
C Fraser, CA Donnelly, S Cauchemez, WP Hanage, MD Van Kerkhove, ...
science 324 (5934), 1557-1561, 2009
25512009
The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study
K Prem, Y Liu, TW Russell, AJ Kucharski, RM Eggo, N Davies, S Flasche, ...
The lancet public health 5 (5), e261-e270, 2020
25252020
Ebola virus disease in West Africa—the first 9 months of the epidemic and forward projections
WHO Ebola Response Team
New England Journal of Medicine 371 (16), 1481-1495, 2014
20142014
Community ecology in the age of multivariate multiscale spatial analysis
S Dray, R Pélissier, P Couteron, MJ Fortin, P Legendre, PR Peres-Neto, ...
Ecological Monographs 82 (3), 257-275, 2012
11772012
Global, regional, and national estimates of the population at increased risk of severe COVID-19 due to underlying health conditions in 2020: a modelling study
A Clark, M Jit, C Warren-Gash, B Guthrie, HHX Wang, SW Mercer, ...
The Lancet Global Health 8 (8), e1003-e1017, 2020
10882020
Effectiveness of isolation, testing, contact tracing, and physical distancing on reducing transmission of SARS-CoV-2 in different settings: a mathematical modelling study
AJ Kucharski, P Klepac, AJK Conlan, SM Kissler, ML Tang, H Fry, JR Gog, ...
The Lancet infectious diseases 20 (10), 1151-1160, 2020
10232020
How to measure and test phylogenetic signal
T Münkemüller, S Lavergne, B Bzeznik, S Dray, T Jombart, K Schiffers, ...
Methods in Ecology and Evolution 3 (4), 743-756, 2012
9812012
Increased transmissibility and global spread of SARS-CoV-2 variants of concern as at June 2021
F Campbell, B Archer, H Laurenson-Schafer, Y Jinnai, F Konings, N Batra, ...
Eurosurveillance 26 (24), 2100509, 2021
8972021
An Aboriginal Australian genome reveals separate human dispersals into Asia
M Rasmussen, X Guo, Y Wang, KE Lohmueller, S Rasmussen, ...
Science 334 (6052), 94-98, 2011
8782011
Effects of non-pharmaceutical interventions on COVID-19 cases, deaths, and demand for hospital services in the UK: a modelling study
NG Davies, AJ Kucharski, RM Eggo, A Gimma, WJ Edmunds, T Jombart, ...
The Lancet Public Health 5 (7), e375-e385, 2020
8762020
COVID-19 length of hospital stay: a systematic review and data synthesis
EM Rees, ES Nightingale, Y Jafari, NR Waterlow, S Clifford, ...
BMC medicine 18, 1-22, 2020
6792020
Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity
G Morelli, Y Song, CJ Mazzoni, M Eppinger, P Roumagnac, DM Wagner, ...
Nature genetics 42 (12), 1140-1143, 2010
6762010
Revealing cryptic spatial patterns in genetic variability by a new multivariate method
T Jombart, S Devillard, AB Dufour, D Pontier
Heredity 101 (1), 92-103, 2008
6512008
Historical variations in mutation rate in an epidemic pathogen, Yersinia pestis
Y Cui, C Yu, Y Yan, D Li, Y Li, T Jombart, LA Weinert, Z Wang, Z Guo, ...
Proceedings of the National Academy of Sciences 110 (2), 577-582, 2013
4992013
Improved inference of time-varying reproduction numbers during infectious disease outbreaks
RN Thompson, JE Stockwin, RD van Gaalen, JA Polonsky, ZN Kamvar, ...
Epidemics 29, 100356, 2019
4812019
hierfstat: estimation and tests of hierarchical F-statistics
J Goudet, T Jombart
R package version 0.04-22 10, 2015
4462015
A tutorial for Discriminant Analysis of Principal Components (DAPC) using adegenet 2.1. 0
T Jombart, C Collins
Imperial College, London, United Kingdom, 2017
3972017
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Articles 1–20