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Shiri Freilich
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Challenges in microbial ecology: building predictive understanding of community function and dynamics
S Widder, RJ Allen, T Pfeiffer, TP Curtis, C Wiuf, WT Sloan, OX Cordero, ...
The ISME journal 10 (11), 2557-2568, 2016
6742016
Competitive and cooperative metabolic interactions in bacterial communities
S Freilich, R Zarecki, O Eilam, ES Segal, CS Henry, M Kupiec, U Gophna, ...
Nature communications 2 (1), 589, 2011
5292011
Construction, visualisation, and clustering of transcription networks from microarray expression data
TC Freeman, L Goldovsky, M Brosch, S Van Dongen, P Mazière, ...
PLoS computational biology 3 (10), e206, 2007
2972007
The large-scale organization of the bacterial network of ecological co-occurrence interactions
S Freilich, A Kreimer, I Meilijson, U Gophna, R Sharan, E Ruppin
Nucleic acids research 38 (12), 3857-3868, 2010
2962010
Emergence, development and diversification of the TGF-βsignalling pathway within the animal kingdom
L Huminiecki, L Goldovsky, S Freilich, A Moustakas, C Ouzounis, ...
BMC evolutionary biology 9, 1-17, 2009
2172009
The COP9 signalosome is essential for development of Drosophila melanogaster
S Freilich, E Oron, Y Kapp, Y Nevo-Caspi, S Orgad, D Segal, ...
Current Biology 9 (20), S1-S4, 1999
1961999
Prospects for biological soilborne disease control: application of indigenous versus synthetic microbiomes
M Mazzola, S Freilich
Phytopathology 107 (3), 256-263, 2017
1942017
The biosynthetic pathway of the nonsugar, high-intensity sweetener mogroside V from Siraitia grosvenorii
M Itkin, R Davidovich-Rikanati, S Cohen, V Portnoy, A Doron-Faigenboim, ...
Proceedings of the National Academy of Sciences 113 (47), E7619-E7628, 2016
1732016
Modeling microbial communities from atrazine contaminated soils promotes the development of biostimulation solutions
X Xu, R Zarecki, S Medina, S Ofaim, X Liu, C Chen, S Hu, D Brom, D Gat, ...
The ISME journal 13 (2), 494-508, 2019
1482019
Metabolic-network-driven analysis of bacterial ecological strategies
S Freilich, A Kreimer, E Borenstein, N Yosef, R Sharan, U Gophna, ...
Genome biology 10, 1-8, 2009
1152009
Association between translation efficiency and horizontal gene transfer within microbial communities
T Tuller, Y Girshovich, Y Sella, A Kreimer, S Freilich, M Kupiec, U Gophna, ...
Nucleic acids research 39 (11), 4743-4755, 2011
1092011
NetCooperate: a network-based tool for inferring host-microbe and microbe-microbe cooperation
R Levy, R Carr, A Kreimer, S Freilich, E Borenstein
BMC bioinformatics 16, 1-6, 2015
912015
Global analysis of the apple fruit microbiome: are all apples the same?
A Abdelfattah, S Freilich, R Bartuv, VY Zhimo, A Kumar, A Biasi, S Salim, ...
Environmental Microbiology 23 (10), 6038-6055, 2021
852021
Variations in the identity and complexity of endosymbiont combinations in whitefly hosts
E Zchori-Fein, T Lahav, S Freilich
Frontiers in microbiology 5, 310, 2014
752014
Effect of washing, waxing and low-temperature storage on the postharvest microbiome of apple
A Abdelfattah, SR Whitehead, D Macarisin, J Liu, E Burchard, S Freilich, ...
Microorganisms 8 (6), 944, 2020
702020
Analysis of microbial functions in the rhizosphere using a metabolic-network based framework for metagenomics interpretation
S Ofaim, M Ofek-Lalzar, N Sela, J Jinag, Y Kashi, D Minz, S Freilich
Frontiers in Microbiology 8, 1606, 2017
692017
To B or Not to B: Comparative Genomics Suggests Arsenophonus as a Source of B Vitamins in Whiteflies
D Santos-Garcia, K Juravel, S Freilich, E Zchori-Fein, A Latorre, A Moya, ...
Frontiers in Microbiology 9, 2254, 2018
612018
Isaac Newton Institute Fellows, Soyer OS. 2016. Challenges in microbial ecology: building predictive understanding of community function and dynamics
S Widder, RJ Allen, T Pfeiffer, TP Curtis, C Wiuf, WT Sloan, OX Cordero, ...
ISME J 10 (11), 2557-2568, 0
58
Compositional shifts in the strawberry fruit microbiome in response to near-harvest application of Metschnikowia fructicola, a yeast biocontrol agent
VY Zhimo, A Kumar, A Biasi, S Salim, O Feygenberg, MA Toamy, ...
Postharvest Biology and Technology 175, 111469, 2021
572021
Systems approach for exploring the intricate associations between sweetness, color and aroma in melon fruits
S Freilich, S Lev, I Gonda, E Reuveni, V Portnoy, E Oren, M Lohse, ...
BMC Plant Biology 15, 1-16, 2015
522015
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