Michael J Sweredoski
Michael J Sweredoski
Proteome Exploration Laboratory at Caltech
Dirección de correo verificada de caltech.edu
Citado por
Citado por
SCRATCH: a protein structure and structural feature prediction server
J Cheng, AZ Randall, MJ Sweredoski, P Baldi
Nucleic acids research 33 (suppl_2), W72-W76, 2005
Broad activation of the ubiquitin–proteasome system by Parkin is critical for mitophagy
NC Chan, AM Salazar, AH Pham, MJ Sweredoski, NJ Kolawa, ...
Human molecular genetics 20 (9), 1726-1737, 2011
The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3
CA McHugh, CK Chen, A Chow, CF Surka, C Tran, P McDonel, ...
Nature 521 (7551), 232-236, 2015
Human gut microbiota from autism spectrum disorder promote behavioral symptoms in mice
G Sharon, NJ Cruz, DW Kang, MJ Gandal, B Wang, YM Kim, EM Zink, ...
Cell 177 (6), 1600-1618. e17, 2019
Accurate prediction of protein disordered regions by mining protein structure data
J Cheng, MJ Sweredoski, P Baldi
Data mining and knowledge discovery 11 (3), 213-222, 2005
Cand1 promotes assembly of new SCF complexes through dynamic exchange of F box proteins
NW Pierce, JE Lee, X Liu, MJ Sweredoski, RLJ Graham, EA Larimore, ...
Cell 153 (1), 206-215, 2013
PEPITO: improved discontinuous B-cell epitope prediction using multiple distance thresholds and half sphere exposure
MJ Sweredoski, P Baldi
Bioinformatics 24 (12), 1459-1460, 2008
COBEpro: a novel system for predicting continuous B-cell epitopes
MJ Sweredoski, P Baldi
Protein Engineering, Design & Selection 22 (3), 113-120, 2009
Evaluation and optimization of mass spectrometric settings during data-dependent acquisition mode: focus on LTQ-Orbitrap mass analyzers
A Kalli, GT Smith, MJ Sweredoski, S Hess
Journal of proteome research 12 (7), 3071-3086, 2013
The top‐down, middle‐down, and bottom‐up mass spectrometry approaches for characterization of histone variants and their post‐translational modifications
A Moradian, A Kalli, MJ Sweredoski, S Hess
Proteomics 14 (4-5), 489-497, 2014
DOMpro: protein domain prediction using profiles, secondary structure, relative solvent accessibility, and recursive neural networks
J Cheng, MJ Sweredoski, P Baldi
Data Mining and Knowledge Discovery 13 (1), 1-10, 2006
A conserved quality-control pathway that mediates degradation of unassembled ribosomal proteins
MK Sung, TR Porras-Yakushi, JM Reitsma, FM Huber, MJ Sweredoski, ...
Elife 5, e19105, 2016
TMBpro: secondary structure, β-contact and tertiary structure prediction of transmembrane β-barrel proteins
A Randall, J Cheng, M Sweredoski, P Baldi
Bioinformatics 24 (4), 513-520, 2008
Glutamine triggers acetylation-dependent degradation of glutamine synthetase via the thalidomide receptor cereblon
T Van Nguyen, JE Lee, MJ Sweredoski, SJ Yang, SJ Jeon, JS Harrison, ...
Molecular cell 61 (6), 809-820, 2016
Characterization of the Mycobacterium tuberculosis Proteome by Liquid Chromatography Mass Spectrometry-based Proteomics Techniques: A Comprehensive …
C Bell, GT Smith, MJ Sweredoski, S Hess
Journal of proteome research 11 (1), 119-130, 2012
Identification of a functional docking site in the Rpn1 LRR domain for the UBA-UBL domain protein Ddi1
TA Gomez, N Kolawa, M Gee, MJ Sweredoski, RJ Deshaies
BMC biology 9 (1), 1-15, 2011
The steady-state repertoire of human SCF ubiquitin ligase complexes does not require ongoing Nedd8 conjugation
JE Lee, MJ Sweredoski, RLJ Graham, NJ Kolawa, GT Smith, S Hess, ...
Molecular & Cellular Proteomics 10 (5), M110. 006460, 2011
Cell-specific proteomic analysis in Caenorhabditis elegans
KP Yuet, MK Doma, JT Ngo, MJ Sweredoski, RLJ Graham, A Moradian, ...
Proceedings of the National Academy of Sciences 112 (9), 2705-2710, 2015
Ribosomal proteins produced in excess are degraded by the ubiquitin–proteasome system
MK Sung, JM Reitsma, MJ Sweredoski, S Hess, RJ Deshaies
Molecular biology of the cell 27 (17), 2642-2652, 2016
Identification of secreted bacterial proteins by noncanonical amino acid tagging
A Mahdavi, J Szychowski, JT Ngo, MJ Sweredoski, RLJ Graham, S Hess, ...
Proceedings of the National Academy of Sciences 111 (1), 433-438, 2014
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Artículos 1–20