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Sayaka Mizutani
Sayaka Mizutani
Verified email at bio.titech.ac.jp
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Year
Metagenomic and metabolomic analyses reveal distinct stage-specific phenotypes of the gut microbiota in colorectal cancer
S Yachida, S Mizutani, H Shiroma, S Shiba, T Nakajima, T Sakamoto, ...
Nature medicine 25 (6), 968-976, 2019
9452019
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ...
Nature medicine 25 (4), 679-689, 2019
9002019
Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation
AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ...
Nature medicine 25 (4), 667-678, 2019
6972019
Relating drug–protein interaction network with drug side effects
S Mizutani, E Pauwels, V Stoven, S Goto, Y Yamanishi
Bioinformatics 28 (18), i522-i528, 2012
2292012
Influence of gastrectomy for gastric cancer treatment on faecal microbiome and metabolome profiles
PP Erawijantari, S Mizutani, H Shiroma, S Shiba, T Nakajima, T Sakamoto, ...
Gut 69 (8), 1404-1415, 2020
1052020
Systematic drug repositioning for a wide range of diseases with integrative analyses of phenotypic and molecular data
H Iwata, R Sawada, S Mizutani, Y Yamanishi
Journal of chemical information and modeling 55 (2), 446-459, 2015
772015
Target-based drug repositioning using large-scale chemical–protein interactome data
R Sawada, H Iwata, S Mizutani, Y Yamanishi
Journal of chemical information and modeling 55 (12), 2717-2730, 2015
712015
An improved method for identifying functionally linked proteins using phylogenetic profiles
S Cokus, S Mizutani, M Pellegrini
BMC bioinformatics 8, 1-12, 2007
652007
Significance of the gut microbiome in multistep colorectal carcinogenesis
S Mizutani, T Yamada, S Yachida
Cancer Science 111 (3), 766-773, 2020
632020
High stability of faecal microbiome composition in guanidine thiocyanate solution at room temperature and robustness during colonoscopy
Y Nishimoto, S Mizutani, T Nakajima, F Hosoda, H Watanabe, Y Saito, ...
Gut 65 (9), 1574-1575, 2016
522016
Minor taxa in human skin microbiome contribute to the personal identification
H Watanabe, I Nakamura, S Mizutani, Y Kurokawa, H Mori, K Kurokawa, ...
PLoS One 13 (7), e0199947, 2018
412018
Large-scale prediction of beneficial drug combinations using drug efficacy and target profiles
H Iwata, R Sawada, S Mizutani, M Kotera, Y Yamanishi
Journal of chemical information and modeling 55 (12), 2705-2716, 2015
362015
Inferring protein domains associated with drug side effects based on drug-target interaction network
H Iwata, S Mizutani, Y Tabei, M Kotera, S Goto, Y Yamanishi
BMC systems biology 7, 1-11, 2013
332013
Leveraging explainable AI for gut microbiome-based colorectal cancer classification
R Rynazal, K Fujisawa, H Shiroma, F Salim, S Mizutani, S Shiba, ...
Genome Biology 24 (1), 21, 2023
152023
Pharmacoepidemiological characterization of drug-induced adverse reaction clusters towards understanding of their mechanisms
S Mizutani, Y Noro, M Kotera, S Goto
Computational biology and chemistry 50, 50-59, 2014
142014
Recent advances of machine learning applications in human gut microbiota study: from observational analysis toward causal inference and clinical intervention
F Salim, S Mizutani, M Zolfo, T Yamada
Current Opinion in Biotechnology 79, 102884, 2023
92023
Author Correction: Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation
AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ...
Nature medicine 25 (12), 1948-1948, 2019
82019
Mediation effect of intestinal microbiota on the relationship between fiber intake and colorectal cancer
Y Shimomura, L Zha, S Komukai, N Narii, T Sobue, T Kitamura, S Shiba, ...
International Journal of Cancer 152 (9), 1752-1762, 2023
42023
Phylogenetic analysis of lipid mediator GPCRs
S Mizutani, M Tanaka, CE Wheelock, M Kanehisa, S Goto
Genome Informatics 2010: Genome Informatics Series Vol. 24, 116-126, 2010
42010
Surgical Treatment for Colorectal Cancer Partially Restores Gut Microbiome and Metabolome Traits
H Shiroma, S Shiba, PP Erawijantari, H Takamaru, M Yamada, ...
Msystems 7 (2), e00018-22, 2022
32022
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