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Massa Shoura
Massa Shoura
Departments of Pathology and Genetics at Stanford University School of Medicine
Verified email at stanford.edu - Homepage
Title
Cited by
Cited by
Year
Mapping the human genetic architecture of COVID-19
Writing group Writing group leaders Pathak Gita A. 6 Andrews Shea J. 7 Kanai ...
Nature 600 (7889), 472-477, 2021
7402021
Immune imprinting, breadth of variant recognition, and germinal center response in human SARS-CoV-2 infection and vaccination
K Röltgen, SCA Nielsen, O Silva, SF Younes, M Zaslavsky, C Costales, ...
Cell 185 (6), 1025-1040. e14, 2022
3522022
Recompleting the Caenorhabditis elegans genome
J Yoshimura, K Ichikawa, MJ Shoura, KL Artiles, I Gabdank, L Wahba, ...
Genome research 29 (6), 1009-1022, 2019
1182019
Intricate and Cell Type-Specific Populations of Endogenous Circular DNA (eccDNA) in Caenorhabditis elegans and Homo sapiens
MJ Shoura, I Gabdank, L Hansen, J Merker, J Gotlib, SD Levene, AZ Fire
G3: Genes, Genomes, Genetics 7 (10), 3295-3303, 2017
1072017
Extrachromosomal DNA—relieving heredity constraints, accelerating tumour evolution
C Bailey, MJ Shoura, PS Mischel, C Swanton
Annals of Oncology 31 (7), 884-893, 2020
742020
Identification of a pangolin niche for a 2019-nCoV-like coronavirus through an extensive meta-metagenomic search
L Wahba, N Jain, AZ Fire, MJ Shoura, KL Artiles, MJ McCoy, DE Jeong
BioRxiv, 2020.02. 08.939660, 2020
532020
An extensive meta-metagenomic search identifies SARS-CoV-2-homologous sequences in pangolin lung viromes
L Wahba, N Jain, AZ Fire, MJ Shoura, KL Artiles, MJ McCoy, DE Jeong
MSphere 5 (3), 10.1128/msphere. 00160-20, 2020
492020
mRNA vaccination compared to infection elicits an IgG-predominant response with greater SARS-CoV-2 specificity and similar decrease in variant spike recognition
K Röltgen, SCA Nielsen, PS Arunachalam, F Yang, RA Hoh, OF Wirz, ...
MedRxiv, 2021
452021
The thermodynamics of DNA loop formation, from J to Z
SD Levene, SM Giovan, A Hanke, MJ Shoura
Biochemical Society Transactions 41 (2), 513-518, 2013
312013
Assemblies-of-putative-SARS-CoV2-spike-encoding-mRNA-sequences-for-vaccines-BNT-162b2-and-mRNA-1273
DE Jeong, M McCoy, K Artiles, O Ilbay, A Fire, K Nadeau, H Park, B Betts, ...
GitHub, no. i, 0-3, 2021
292021
Measurements of DNA-loop formation via Cre-mediated recombination
MJ Shoura, AA Vetcher, SM Giovan, F Bardai, A Bharadwaj, MR Kesinger, ...
Nucleic acids research 40 (15), 7452-7464, 2012
272012
Contribution of fluorophore dynamics and solvation to resonant energy transfer in protein-DNA complexes: a molecular-dynamics study
MJ Shoura, RJKU Ranatunga, SA Harris, SO Nielsen, SD Levene
Biophysical journal 107 (3), 700-710, 2014
172014
Discrete and topological models in molecular biology
N Jonoska, M Saito
Springer Science & Business Media, 2013
142013
High-throughput SARS-CoV-2 and host genome sequencing from single nasopharyngeal swabs
JE Gorzynski, HN De Jong, D Amar, C Hughes, A Ioannidis, R Bierman, ...
medRxiv, 2020.07. 27.20163147, 2020
132020
Deconvolution of nucleic-acid length distributions: a gel electrophoresis analysis tool and applications
R Ziraldo, MJ Shoura, AZ Fire, SD Levene
Nucleic Acids Research 47 (16), e92-e92, 2019
122019
Deconvoluting complex correlates of COVID-19 severity with a multi-omic pandemic tracking strategy
VN Parikh, AG Ioannidis, D Jimenez-Morales, JE Gorzynski, HN De Jong, ...
Nature communications 13 (1), 5107, 2022
72022
Securing the future of research computing in the biosciences
J Leng, M Shoura, TCB McLeish, AN Real, M Hardey, J McCafferty, ...
PLoS computational biology 15 (5), e1006958, 2019
52019
Loop-closure kinetics reveal a stable, right-handed DNA intermediate in Cre recombination
MJ Shoura, SM Giovan, AA Vetcher, R Ziraldo, A Hanke, SD Levene
Nucleic Acids Research 48 (8), 4371-4381, 2020
42020
Understanding DNA looping through Cre-recombination kinetics
MJ Shoura, SD Levene
Discrete and Topological Models in Molecular Biology, 405-418, 2013
42013
Context-dependent DNA polymerization effects can masquerade as DNA modification signals
Y Takahashi, M Shoura, A Fire, S Morishita
BMC genomics 23 (1), 249, 2022
22022
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